Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Dctn4-202ENSMUST00000223590 1530 ntBASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Gm5187-201ENSMUST00000117317 991 ntBASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Gm12500-202ENSMUST00000186471 2428 ntBASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Gm45684-201ENSMUST00000210244 1571 ntBASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Gm6161-201ENSMUST00000121942 1102 ntBASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Gm17420-201ENSMUST00000164753 153 ntBASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Gm6254-201ENSMUST00000168178 1072 ntBASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Gm6153-201ENSMUST00000172004 1058 ntBASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Gm5641-202ENSMUST00000198699 1080 ntBASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cpsf1Q9EPU4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Gm2824-203ENSMUST00000226189 1228 ntBASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf1Q9EPU4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Gm16202-201ENSMUST00000117532 544 ntBASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Gm26927-201ENSMUST00000182385 965 ntBASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf1Q9EPU4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Cpsf1Q9EPU4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cpsf1Q9EPU4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf1Q9EPU4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms