Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Gm42612-201ENSMUST00000197986 623 ntBASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Gm43170-201ENSMUST00000199827 612 ntBASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.79□□□□□ -0.36
Cdc40Q9DC48 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Gm12490-201ENSMUST00000120255 560 ntBASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Gm12091-201ENSMUST00000146791 830 ntBASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Gm33320-201ENSMUST00000192232 530 ntBASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.78□□□□□ -0.36
Cdc40Q9DC48 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdc40Q9DC48 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdc40Q9DC48 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Gm9797-201ENSMUST00000052902 613 ntBASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdc40Q9DC48 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms