Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssmem1Q9D9Y8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Gm44719-201ENSMUST00000206404 149 ntBASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.88□□□□□ -0.51
Ssmem1Q9D9Y8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Gm8515-201ENSMUST00000194852 576 ntBASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Gm45668-201ENSMUST00000211271 493 ntBASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Gm18624-201ENSMUST00000220966 658 ntBASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.87□□□□□ -0.51
Ssmem1Q9D9Y8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms