Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC18.05■□□□□ 0.48
U2af1Q9D883 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.05■□□□□ 0.48
U2af1Q9D883 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
U2af1Q9D883 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
U2af1Q9D883 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
U2af1Q9D883 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC18.04■□□□□ 0.48
U2af1Q9D883 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.04■□□□□ 0.48
U2af1Q9D883 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.04■□□□□ 0.48
U2af1Q9D883 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.04■□□□□ 0.48
U2af1Q9D883 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
U2af1Q9D883 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
U2af1Q9D883 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
U2af1Q9D883 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2af1Q9D883 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
U2af1Q9D883 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
U2af1Q9D883 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
U2af1Q9D883 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.03■□□□□ 0.48
U2af1Q9D883 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
U2af1Q9D883 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.03■□□□□ 0.48
U2af1Q9D883 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
U2af1Q9D883 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
U2af1Q9D883 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC18.03■□□□□ 0.48
U2af1Q9D883 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
U2af1Q9D883 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
U2af1Q9D883 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
U2af1Q9D883 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Gm15770-201ENSMUST00000117498 584 ntBASIC18.02■□□□□ 0.48
U2af1Q9D883 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
U2af1Q9D883 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.02■□□□□ 0.48
U2af1Q9D883 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
U2af1Q9D883 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
U2af1Q9D883 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
U2af1Q9D883 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
U2af1Q9D883 Gm5161-201ENSMUST00000075243 853 ntBASIC18.02■□□□□ 0.48
U2af1Q9D883 Gm24447-201ENSMUST00000083977 338 ntBASIC18.02■□□□□ 0.48
U2af1Q9D883 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
U2af1Q9D883 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
U2af1Q9D883 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
U2af1Q9D883 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
U2af1Q9D883 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
U2af1Q9D883 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
U2af1Q9D883 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC18.01■□□□□ 0.47
U2af1Q9D883 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.01■□□□□ 0.47
U2af1Q9D883 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC18.01■□□□□ 0.47
U2af1Q9D883 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.01■□□□□ 0.47
U2af1Q9D883 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms