Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Gm5354-201ENSMUST00000182417 973 ntBASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Tmem54Q9D7S1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Gm12859-201ENSMUST00000117834 427 ntBASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms