Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Gm45098-201ENSMUST00000207179 657 ntBASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3a3Q9D554 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sf3a3Q9D554 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Sf3a3Q9D554 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.9□□□□□ -0.19
Sf3a3Q9D554 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.9□□□□□ -0.19
Sf3a3Q9D554 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sf3a3Q9D554 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3a3Q9D554 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms