Protein–RNA interactions for Protein: Q9CY34

Ube2f, NEDD8-conjugating enzyme UBE2F, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fQ9CY34 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ube2fQ9CY34 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 AC107452.3-201ENSMUST00000228807 1308 ntBASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Gm5177-201ENSMUST00000183092 997 ntBASIC12.43□□□□□ -0.42
Ube2fQ9CY34 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Ube2fQ9CY34 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Gm14140-201ENSMUST00000119999 995 ntBASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Gm27920-201ENSMUST00000183953 96 ntBASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Gm2594-201ENSMUST00000214774 742 ntBASIC12.42□□□□□ -0.42
Ube2fQ9CY34 Thap2-203ENSMUST00000218989 527 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms