Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chd1lQ9CXF7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Mir5126-201ENSMUST00000175513 77 ntBASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd1lQ9CXF7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Syt7-205ENSMUST00000224135 1557 ntBASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd1lQ9CXF7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chd1lQ9CXF7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd1lQ9CXF7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd1lQ9CXF7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd1lQ9CXF7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd1lQ9CXF7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms