Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pfdn1Q9CWM4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pfdn1Q9CWM4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Gm5417-201ENSMUST00000079706 384 ntBASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pfdn1Q9CWM4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pfdn1Q9CWM4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms