Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.68□□□□□ -0.22
Trim33Q99PP7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim33Q99PP7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Gm27989-201ENSMUST00000184721 107 ntBASIC13.68□□□□□ -0.22
Trim33Q99PP7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Gm20949-201ENSMUST00000206478 952 ntBASIC13.68□□□□□ -0.22
Trim33Q99PP7 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.68□□□□□ -0.22
Trim33Q99PP7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.68□□□□□ -0.22
Trim33Q99PP7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.68□□□□□ -0.22
Trim33Q99PP7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim33Q99PP7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.67□□□□□ -0.22
Trim33Q99PP7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gm10576-201ENSMUST00000191927 825 ntBASIC13.67□□□□□ -0.22
Trim33Q99PP7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gm37714-201ENSMUST00000194742 342 ntBASIC13.67□□□□□ -0.22
Trim33Q99PP7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 AC132260.2-201ENSMUST00000224482 344 ntBASIC13.67□□□□□ -0.22
Trim33Q99PP7 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.67□□□□□ -0.22
Trim33Q99PP7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms