Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rnf111Q99ML9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm8410-201ENSMUST00000117225 605 ntBASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm6415-201ENSMUST00000118488 348 ntBASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm12882-201ENSMUST00000121696 517 ntBASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm9719-201ENSMUST00000162765 543 ntBASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm27631-201ENSMUST00000184163 466 ntBASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm45453-201ENSMUST00000211758 853 ntBASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.34□□□□□ -0.27
Rnf111Q99ML9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf111Q99ML9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf111Q99ML9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf111Q99ML9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf111Q99ML9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Rnf111Q99ML9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf111Q99ML9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms