Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.06□□□□□ -0.48
Scrt1Q99M85 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Scrt1Q99M85 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.06□□□□□ -0.48
Scrt1Q99M85 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.06□□□□□ -0.48
Scrt1Q99M85 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Gm21470-201ENSMUST00000187680 696 ntBASIC12.05□□□□□ -0.48
Scrt1Q99M85 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.05□□□□□ -0.48
Scrt1Q99M85 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scrt1Q99M85 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.04□□□□□ -0.48
Scrt1Q99M85 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.04□□□□□ -0.48
Scrt1Q99M85 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.04□□□□□ -0.48
Scrt1Q99M85 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.04□□□□□ -0.48
Scrt1Q99M85 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms