Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Gm8515-201ENSMUST00000194852 576 ntBASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha2Q91Y17 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gm9908-201ENSMUST00000211534 448 ntBASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdha2Q91Y17 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms