Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Gm28631-201ENSMUST00000190740 334 ntBASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Gm19078-201ENSMUST00000206311 727 ntBASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Gm11524-201ENSMUST00000119349 807 ntBASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha9Q91Y11 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha9Q91Y11 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.58□□□□□ -0.07
Pcdha9Q91Y11 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha9Q91Y11 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Pcdha9Q91Y11 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Pcdha9Q91Y11 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha9Q91Y11 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha9Q91Y11 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha9Q91Y11 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Gm24447-201ENSMUST00000083977 338 ntBASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms