Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb1Q91Y08 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Gm27989-201ENSMUST00000184721 107 ntBASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb1Q91Y08 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Gm18905-201ENSMUST00000205454 928 ntBASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb1Q91Y08 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms