Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb4Q91XZ6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb4Q91XZ6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb4Q91XZ6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb4Q91XZ6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.7□□□□□ -0.22
Pcdhb4Q91XZ6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb4Q91XZ6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb4Q91XZ6 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.7□□□□□ -0.22
Pcdhb4Q91XZ6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Gm18041-201ENSMUST00000218210 618 ntBASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb4Q91XZ6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Pck2-205ENSMUST00000226352 2784 ntBASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb4Q91XZ6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb4Q91XZ6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms