Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Gm24543-201ENSMUST00000103867 82 ntBASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga3Q91XY5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Gm25948-201ENSMUST00000175334 112 ntBASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Gm27622-201ENSMUST00000183779 60 ntBASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Gm28630-201ENSMUST00000187806 498 ntBASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Gm16476-201ENSMUST00000221544 139 ntBASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhga3Q91XY5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga3Q91XY5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga3Q91XY5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga3Q91XY5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga3Q91XY5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga3Q91XY5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhga3Q91XY5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Pcdhga3Q91XY5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms