Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Usb1Q91W78 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Usb1Q91W78 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Usb1Q91W78 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.62□□□□□ -0.23
Usb1Q91W78 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.62□□□□□ -0.23
Usb1Q91W78 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.62□□□□□ -0.23
Usb1Q91W78 Gm24694-201ENSMUST00000180054 110 ntBASIC13.62□□□□□ -0.23
Usb1Q91W78 Gm27663-201ENSMUST00000184839 110 ntBASIC13.62□□□□□ -0.23
Usb1Q91W78 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.62□□□□□ -0.23
Usb1Q91W78 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Usb1Q91W78 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.62□□□□□ -0.23
Usb1Q91W78 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.62□□□□□ -0.23
Usb1Q91W78 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usb1Q91W78 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Usb1Q91W78 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Usb1Q91W78 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Usb1Q91W78 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.61□□□□□ -0.23
Usb1Q91W78 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.61□□□□□ -0.23
Usb1Q91W78 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Usb1Q91W78 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Usb1Q91W78 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Usb1Q91W78 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.61□□□□□ -0.23
Usb1Q91W78 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.61□□□□□ -0.23
Usb1Q91W78 Gm43703-201ENSMUST00000200523 763 ntBASIC13.61□□□□□ -0.23
Usb1Q91W78 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Usb1Q91W78 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usb1Q91W78 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usb1Q91W78 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.61□□□□□ -0.23
Usb1Q91W78 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.61□□□□□ -0.23
Usb1Q91W78 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Usb1Q91W78 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usb1Q91W78 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Usb1Q91W78 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.6□□□□□ -0.23
Usb1Q91W78 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Usb1Q91W78 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Usb1Q91W78 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.6□□□□□ -0.23
Usb1Q91W78 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Usb1Q91W78 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Usb1Q91W78 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.6□□□□□ -0.23
Usb1Q91W78 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usb1Q91W78 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usb1Q91W78 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms