Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp3Q91W36 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Usp3Q91W36 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.14□□□□□ -0.15
Usp3Q91W36 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp3Q91W36 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp3Q91W36 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.14□□□□□ -0.15
Usp3Q91W36 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.14□□□□□ -0.15
Usp3Q91W36 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp3Q91W36 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.14□□□□□ -0.15
Usp3Q91W36 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp3Q91W36 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.14□□□□□ -0.15
Usp3Q91W36 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp3Q91W36 CT009754.4-201ENSMUST00000221430 565 ntBASIC14.14□□□□□ -0.15
Usp3Q91W36 Gm24447-201ENSMUST00000083977 338 ntBASIC14.14□□□□□ -0.15
Usp3Q91W36 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.14□□□□□ -0.15
Usp3Q91W36 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp3Q91W36 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp3Q91W36 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp3Q91W36 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp3Q91W36 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Usp3Q91W36 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.13□□□□□ -0.15
Usp3Q91W36 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.13□□□□□ -0.15
Usp3Q91W36 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp3Q91W36 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Gm12485-201ENSMUST00000119641 291 ntBASIC14.13□□□□□ -0.15
Usp3Q91W36 Gm11424-201ENSMUST00000121929 829 ntBASIC14.13□□□□□ -0.15
Usp3Q91W36 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp3Q91W36 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp3Q91W36 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp3Q91W36 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.13□□□□□ -0.15
Usp3Q91W36 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Gm45384-201ENSMUST00000210451 277 ntBASIC14.13□□□□□ -0.15
Usp3Q91W36 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.13□□□□□ -0.15
Usp3Q91W36 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.13□□□□□ -0.15
Usp3Q91W36 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Usp3Q91W36 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Usp3Q91W36 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp3Q91W36 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Usp3Q91W36 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp3Q91W36 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.13□□□□□ -0.15
Usp3Q91W36 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usp3Q91W36 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp3Q91W36 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.12□□□□□ -0.15
Usp3Q91W36 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms