Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Ddx41Q91VN6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx41Q91VN6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Mir6392-201ENSMUST00000184924 108 ntBASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Grk6-205ENSMUST00000224653 2976 ntBASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx41Q91VN6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Ddx41Q91VN6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx41Q91VN6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.77■□□□□ 0.11
Ddx41Q91VN6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Ddx41Q91VN6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx41Q91VN6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 205.3 ms