Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.83□□□□□ -0.52
Tram1Q91V04 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.83□□□□□ -0.52
Tram1Q91V04 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tram1Q91V04 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.83□□□□□ -0.52
Tram1Q91V04 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.83□□□□□ -0.52
Tram1Q91V04 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.83□□□□□ -0.52
Tram1Q91V04 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.83□□□□□ -0.52
Tram1Q91V04 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.83□□□□□ -0.52
Tram1Q91V04 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.83□□□□□ -0.52
Tram1Q91V04 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Tram1Q91V04 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tram1Q91V04 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Tram1Q91V04 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.83□□□□□ -0.52
Tram1Q91V04 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Tram1Q91V04 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tram1Q91V04 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.83□□□□□ -0.52
Tram1Q91V04 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.83□□□□□ -0.52
Tram1Q91V04 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tram1Q91V04 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tram1Q91V04 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Tram1Q91V04 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tram1Q91V04 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.82□□□□□ -0.52
Tram1Q91V04 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.82□□□□□ -0.52
Tram1Q91V04 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.82□□□□□ -0.52
Tram1Q91V04 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.82□□□□□ -0.52
Tram1Q91V04 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.82□□□□□ -0.52
Tram1Q91V04 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.82□□□□□ -0.52
Tram1Q91V04 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.82□□□□□ -0.52
Tram1Q91V04 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.82□□□□□ -0.52
Tram1Q91V04 Thap2-203ENSMUST00000218989 527 ntBASIC11.82□□□□□ -0.52
Tram1Q91V04 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tram1Q91V04 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.82□□□□□ -0.52
Tram1Q91V04 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.82□□□□□ -0.52
Tram1Q91V04 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tram1Q91V04 Paupar-201ENSMUST00000194826 3482 ntBASIC11.81□□□□□ -0.52
Tram1Q91V04 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tram1Q91V04 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.81□□□□□ -0.52
Tram1Q91V04 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tram1Q91V04 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.81□□□□□ -0.52
Tram1Q91V04 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.81□□□□□ -0.52
Tram1Q91V04 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.81□□□□□ -0.52
Tram1Q91V04 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Gm43347-201ENSMUST00000200226 580 ntBASIC11.81□□□□□ -0.52
Tram1Q91V04 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.81□□□□□ -0.52
Tram1Q91V04 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.81□□□□□ -0.52
Tram1Q91V04 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tram1Q91V04 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms