Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Gm6991-201ENSMUST00000218475 1178 ntBASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Gm15590-201ENSMUST00000078419 552 ntBASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Gm38116-201ENSMUST00000193873 1533 ntBASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Gm12350-201ENSMUST00000121208 462 ntBASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Gm5177-201ENSMUST00000183092 997 ntBASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Gm27628-201ENSMUST00000184911 107 ntBASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Thoc7-209ENSMUST00000225325 765 ntBASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.85□□□□□ -0.19
Rpa1Q8VEE4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Pck2-205ENSMUST00000226352 2784 ntBASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Gm27920-201ENSMUST00000183953 96 ntBASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpa1Q8VEE4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpa1Q8VEE4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpa1Q8VEE4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpa1Q8VEE4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms