Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Vps39Q8R5L3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Mir698-201ENSMUST00000102164 109 ntBASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Mir1897-201ENSMUST00000122581 272 ntBASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Gm25144-201ENSMUST00000179561 110 ntBASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Gm25352-201ENSMUST00000179815 110 ntBASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Gm27622-201ENSMUST00000183779 60 ntBASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vps39Q8R5L3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps39Q8R5L3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps39Q8R5L3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps39Q8R5L3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps39Q8R5L3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
Vps39Q8R5L3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps39Q8R5L3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Vps39Q8R5L3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Vps39Q8R5L3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Vps39Q8R5L3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Vps39Q8R5L3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Gm15460-201ENSMUST00000118147 391 ntBASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Gm12428-201ENSMUST00000119844 727 ntBASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Gm27430-201ENSMUST00000184585 107 ntBASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Gm44333-201ENSMUST00000197168 107 ntBASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Gm9229-201ENSMUST00000222777 126 ntBASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps39Q8R5L3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms