Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp7Q8R1T1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp7Q8R1T1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp7Q8R1T1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp7Q8R1T1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Chmp7Q8R1T1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.52■□□□□ 0.39
Chmp7Q8R1T1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Gm4271-201ENSMUST00000174444 973 ntBASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Gm43179-201ENSMUST00000198797 275 ntBASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp7Q8R1T1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Gm7399-201ENSMUST00000032395 858 ntBASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.5■□□□□ 0.39
Chmp7Q8R1T1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Gm1335-201ENSMUST00000121653 386 ntBASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Gm6013-201ENSMUST00000212264 699 ntBASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp7Q8R1T1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms