Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Gm27516-201ENSMUST00000184237 98 ntBASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Vopp1Q8R1C3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vopp1Q8R1C3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms