Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3a1Q8K4Z5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3a1Q8K4Z5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3a1Q8K4Z5 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Gm5279-201ENSMUST00000199575 745 ntBASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms