Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.98□□□□□ -0.33
Clrn1Q8K445 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Mir698-201ENSMUST00000102164 109 ntBASIC12.98□□□□□ -0.33
Clrn1Q8K445 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.98□□□□□ -0.33
Clrn1Q8K445 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gm8927-201ENSMUST00000181978 981 ntBASIC12.98□□□□□ -0.33
Clrn1Q8K445 Mir7684-201ENSMUST00000183858 60 ntBASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gm20949-201ENSMUST00000206478 952 ntBASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gm5425-201ENSMUST00000214125 459 ntBASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gm3222-201ENSMUST00000071282 990 ntBASIC12.98□□□□□ -0.33
Clrn1Q8K445 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.98□□□□□ -0.33
Clrn1Q8K445 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Gm13385-201ENSMUST00000121089 220 ntBASIC12.97□□□□□ -0.33
Clrn1Q8K445 Gm15487-201ENSMUST00000122373 465 ntBASIC12.97□□□□□ -0.33
Clrn1Q8K445 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.97□□□□□ -0.33
Clrn1Q8K445 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.97□□□□□ -0.33
Clrn1Q8K445 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn1Q8K445 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms