Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.06□□□□□ -0.16
CopaQ8CIE6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.05□□□□□ -0.16
CopaQ8CIE6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Gm9522-201ENSMUST00000182394 926 ntBASIC14.05□□□□□ -0.16
CopaQ8CIE6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.05□□□□□ -0.16
CopaQ8CIE6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.05□□□□□ -0.16
CopaQ8CIE6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CopaQ8CIE6 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.04□□□□□ -0.16
CopaQ8CIE6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.04□□□□□ -0.16
CopaQ8CIE6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Gm42612-201ENSMUST00000197986 623 ntBASIC14.04□□□□□ -0.16
CopaQ8CIE6 Gm43170-201ENSMUST00000199827 612 ntBASIC14.04□□□□□ -0.16
CopaQ8CIE6 Gm6916-202ENSMUST00000205523 195 ntBASIC14.04□□□□□ -0.16
CopaQ8CIE6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CopaQ8CIE6 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.03□□□□□ -0.16
CopaQ8CIE6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.03□□□□□ -0.16
CopaQ8CIE6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms