Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.02■□□□□ -0
Sox30Q8CGW4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Sox30Q8CGW4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Sox30Q8CGW4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Gm15693-201ENSMUST00000120470 637 ntBASIC15.02■□□□□ -0
Sox30Q8CGW4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.02■□□□□ -0
Sox30Q8CGW4 Gm10766-202ENSMUST00000194123 606 ntBASIC15.02■□□□□ -0
Sox30Q8CGW4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sox30Q8CGW4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox30Q8CGW4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sox30Q8CGW4 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.02■□□□□ -0
Sox30Q8CGW4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox30Q8CGW4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Gm4995-201ENSMUST00000117247 432 ntBASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.01□□□□□ -0.01
Sox30Q8CGW4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Gm24420-201ENSMUST00000176676 59 ntBASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Gm4804-201ENSMUST00000182234 999 ntBASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Mir7221-201ENSMUST00000184009 72 ntBASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox30Q8CGW4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sox30Q8CGW4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Gm6912-201ENSMUST00000117218 544 ntBASIC15□□□□□ -0.01
Sox30Q8CGW4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15□□□□□ -0.01
Sox30Q8CGW4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Gm43474-201ENSMUST00000196415 774 ntBASIC15□□□□□ -0.01
Sox30Q8CGW4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Sox30Q8CGW4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sox30Q8CGW4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sox30Q8CGW4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sox30Q8CGW4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sox30Q8CGW4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15□□□□□ -0.01
Sox30Q8CGW4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox30Q8CGW4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox30Q8CGW4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox30Q8CGW4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox30Q8CGW4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox30Q8CGW4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox30Q8CGW4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sox30Q8CGW4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms