Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccdc28bQ8CEG5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc28bQ8CEG5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Ccdc28bQ8CEG5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc28bQ8CEG5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc28bQ8CEG5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.58□□□□□ -0.23
Ccdc28bQ8CEG5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc28bQ8CEG5 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc28bQ8CEG5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Mir5131-201ENSMUST00000175426 93 ntBASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc28bQ8CEG5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms