Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Gm22189-201ENSMUST00000103822 86 ntBASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Gm12859-201ENSMUST00000117834 427 ntBASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.23■□□□□ 0.19
Nup88Q8CEC0 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Gm9794-201ENSMUST00000202370 423 ntBASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Gm6218-201ENSMUST00000219812 628 ntBASIC16.23■□□□□ 0.19
Nup88Q8CEC0 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.23■□□□□ 0.19
Nup88Q8CEC0 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nup88Q8CEC0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup88Q8CEC0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup88Q8CEC0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms