Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Gm12428-201ENSMUST00000119844 727 ntBASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Mir449b-201ENSMUST00000104833 80 ntBASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Mir6977-201ENSMUST00000184960 64 ntBASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vcpip1Q8CDG3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Gm28630-201ENSMUST00000187806 498 ntBASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Gm18027-201ENSMUST00000218947 619 ntBASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vcpip1Q8CDG3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms