Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.01■□□□□ 0.15
Vps53Q8CCB4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.01■□□□□ 0.15
Vps53Q8CCB4 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Gm9229-201ENSMUST00000222777 126 ntBASIC16.01■□□□□ 0.15
Vps53Q8CCB4 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps53Q8CCB4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Vps53Q8CCB4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Vps53Q8CCB4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Vps53Q8CCB4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Vps53Q8CCB4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16■□□□□ 0.15
Vps53Q8CCB4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16■□□□□ 0.15
Vps53Q8CCB4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16■□□□□ 0.15
Vps53Q8CCB4 Gm45453-201ENSMUST00000211758 853 ntBASIC16■□□□□ 0.15
Vps53Q8CCB4 AC149588.3-201ENSMUST00000227515 150 ntBASIC16■□□□□ 0.15
Vps53Q8CCB4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vps53Q8CCB4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Mmp14-206ENSMUST00000225641 3238 ntBASIC16■□□□□ 0.15
Vps53Q8CCB4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16■□□□□ 0.15
Vps53Q8CCB4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16■□□□□ 0.15
Vps53Q8CCB4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
Vps53Q8CCB4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Vps53Q8CCB4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vps53Q8CCB4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Gm15957-201ENSMUST00000118893 974 ntBASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Gm37917-201ENSMUST00000194711 392 ntBASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Gm44608-201ENSMUST00000206827 855 ntBASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps53Q8CCB4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms