Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Gm21854-201ENSMUST00000179901 471 ntBASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Mir8102-201ENSMUST00000184148 139 ntBASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Gm27838-201ENSMUST00000184829 128 ntBASIC15.17■□□□□ 0.02
Trim9Q8C7M3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim9Q8C7M3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Mir7023-201ENSMUST00000185093 64 ntBASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim9Q8C7M3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Gm14719-201ENSMUST00000121891 340 ntBASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim9Q8C7M3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim9Q8C7M3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim9Q8C7M3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim9Q8C7M3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms