Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a6Q8C6K9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Gm5161-201ENSMUST00000075243 853 ntBASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Acot6-202ENSMUST00000222921 3622 ntBASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Gm26083-201ENSMUST00000157904 193 ntBASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.37□□□□□ -0.43
Col6a6Q8C6K9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Gm42550-201ENSMUST00000201553 960 ntBASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Gm9368-201ENSMUST00000219348 831 ntBASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms