Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Gm13223-201ENSMUST00000118609 747 ntBASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Gm20949-201ENSMUST00000206478 952 ntBASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.54□□□□□ -0.08
Trerf1Q8BXJ2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Gm45453-201ENSMUST00000211758 853 ntBASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.53□□□□□ -0.08
Trerf1Q8BXJ2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trerf1Q8BXJ2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trerf1Q8BXJ2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trerf1Q8BXJ2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trerf1Q8BXJ2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms