Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm5356-201ENSMUST00000093326 615 ntBASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm15371-201ENSMUST00000117057 784 ntBASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm15429-201ENSMUST00000151268 798 ntBASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm8602-201ENSMUST00000184045 607 ntBASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdk5rap1Q8BTW8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm17794-201ENSMUST00000220252 955 ntBASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk5rap1Q8BTW8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms