Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpne3Q8BT60 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.29□□□□□ -0.28
Cpne3Q8BT60 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Gm5566-201ENSMUST00000116118 459 ntBASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Gm2445-201ENSMUST00000182798 989 ntBASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Gm29541-201ENSMUST00000191351 678 ntBASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpne3Q8BT60 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpne3Q8BT60 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne3Q8BT60 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne3Q8BT60 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cpne3Q8BT60 Gm22065-201ENSMUST00000103753 110 ntBASIC13.27□□□□□ -0.29
Cpne3Q8BT60 Gm22066-201ENSMUST00000103761 110 ntBASIC13.27□□□□□ -0.29
Cpne3Q8BT60 Gm24932-201ENSMUST00000103763 110 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms