Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Gm24644-201ENSMUST00000157114 139 ntBASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Gm45784-201ENSMUST00000188360 142 ntBASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.66■□□□□ 0.1
Scfd1Q8BRF7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Proscos-202ENSMUST00000178990 666 ntBASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scfd1Q8BRF7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.1
Scfd1Q8BRF7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Scfd1Q8BRF7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm8213-201ENSMUST00000118191 441 ntBASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm14660-201ENSMUST00000119809 575 ntBASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm10156-201ENSMUST00000122364 462 ntBASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm22331-201ENSMUST00000158066 136 ntBASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm8810-201ENSMUST00000172895 754 ntBASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms