Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Mir125a-201ENSMUST00000083545 68 ntBASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm13365-201ENSMUST00000121188 973 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm27494-201ENSMUST00000184735 189 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm5264-201ENSMUST00000190584 848 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm18049-201ENSMUST00000208909 581 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp2bQ8BJF9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp2bQ8BJF9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp2bQ8BJF9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Gm4995-201ENSMUST00000117247 432 ntBASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Gm27525-201ENSMUST00000184465 107 ntBASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Gm18027-201ENSMUST00000218947 619 ntBASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Chmp2bQ8BJF9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2bQ8BJF9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2bQ8BJF9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2bQ8BJF9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp2bQ8BJF9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms