Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Gm13453-201ENSMUST00000118708 357 ntBASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Gm33320-201ENSMUST00000192232 530 ntBASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Shd-206ENSMUST00000225145 998 ntBASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn3Q8BHH8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.96□□□□□ -0.34
Clrn3Q8BHH8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Clrn3Q8BHH8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clrn3Q8BHH8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Clrn3Q8BHH8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Grk6-205ENSMUST00000224653 2976 ntBASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Gm12428-201ENSMUST00000119844 727 ntBASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Mir1897-201ENSMUST00000122581 272 ntBASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Clrn3Q8BHH8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Gm3436-201ENSMUST00000179930 840 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms