Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx42Q810A7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx42Q810A7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx42Q810A7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ddx42Q810A7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx42Q810A7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ddx42Q810A7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Gm22175-201ENSMUST00000175007 78 ntBASIC14.03□□□□□ -0.16
Ddx42Q810A7 Gm25948-201ENSMUST00000175334 112 ntBASIC14.03□□□□□ -0.16
Ddx42Q810A7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.03□□□□□ -0.16
Ddx42Q810A7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.03□□□□□ -0.16
Ddx42Q810A7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ddx42Q810A7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.03□□□□□ -0.16
Ddx42Q810A7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx42Q810A7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx42Q810A7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx42Q810A7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.02□□□□□ -0.16
Ddx42Q810A7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ddx42Q810A7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx42Q810A7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx42Q810A7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx42Q810A7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx42Q810A7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx42Q810A7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx42Q810A7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx42Q810A7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx42Q810A7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.02□□□□□ -0.17
Ddx42Q810A7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx42Q810A7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm22065-201ENSMUST00000103753 110 ntBASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm22066-201ENSMUST00000103761 110 ntBASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm24932-201ENSMUST00000103763 110 ntBASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm24115-201ENSMUST00000103799 110 ntBASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm22190-201ENSMUST00000103827 110 ntBASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm22191-201ENSMUST00000103831 110 ntBASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm24721-201ENSMUST00000103849 110 ntBASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm28018-201ENSMUST00000103869 110 ntBASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm26399-201ENSMUST00000103937 110 ntBASIC14.01□□□□□ -0.17
Ddx42Q810A7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm25349-201ENSMUST00000177728 110 ntBASIC14.01□□□□□ -0.17
Ddx42Q810A7 Gm23616-201ENSMUST00000177797 110 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms