Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Gm19184-201ENSMUST00000196798 928 ntBASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp6nlQ80XC3 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Gm45880-201ENSMUST00000213041 853 ntBASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp6nlQ80XC3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Gm1335-201ENSMUST00000121653 386 ntBASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Gm29608-201ENSMUST00000190444 463 ntBASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Gm38144-201ENSMUST00000192790 465 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms