Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.29□□□□□ -0.28
Trim36Q80WG7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.28□□□□□ -0.28
Trim36Q80WG7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim36Q80WG7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim36Q80WG7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim36Q80WG7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim36Q80WG7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim36Q80WG7 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.27□□□□□ -0.28
Trim36Q80WG7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim36Q80WG7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim36Q80WG7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Gm10275-202ENSMUST00000168697 495 ntBASIC13.27□□□□□ -0.29
Trim36Q80WG7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.27□□□□□ -0.29
Trim36Q80WG7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.27□□□□□ -0.29
Trim36Q80WG7 Gm10275-201ENSMUST00000092620 635 ntBASIC13.27□□□□□ -0.29
Trim36Q80WG7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.27□□□□□ -0.29
Trim36Q80WG7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.27□□□□□ -0.29
Trim36Q80WG7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim36Q80WG7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms