Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Gm8602-201ENSMUST00000184045 607 ntBASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Gm15678-201ENSMUST00000117573 960 ntBASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Gm26464-201ENSMUST00000157094 305 ntBASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Gm17794-201ENSMUST00000220252 955 ntBASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh19Q80TF3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Gm15824-201ENSMUST00000119516 955 ntBASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Gm15429-201ENSMUST00000151268 798 ntBASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Gm2445-201ENSMUST00000182798 989 ntBASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms