Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1gQ80T11 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Ush1gQ80T11 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ush1gQ80T11 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ush1gQ80T11 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ush1gQ80T11 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ush1gQ80T11 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.02■□□□□ -0
Ush1gQ80T11 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ush1gQ80T11 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.02■□□□□ -0
Ush1gQ80T11 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ush1gQ80T11 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ush1gQ80T11 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ush1gQ80T11 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.02■□□□□ -0
Ush1gQ80T11 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.02■□□□□ -0
Ush1gQ80T11 Gm42693-201ENSMUST00000196779 631 ntBASIC15.02■□□□□ -0
Ush1gQ80T11 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ush1gQ80T11 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ush1gQ80T11 Mir497b-201ENSMUST00000093601 125 ntBASIC15.02■□□□□ -0
Ush1gQ80T11 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ush1gQ80T11 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ush1gQ80T11 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ush1gQ80T11 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ush1gQ80T11 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ush1gQ80T11 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ush1gQ80T11 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ush1gQ80T11 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Ush1gQ80T11 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ush1gQ80T11 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ush1gQ80T11 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ush1gQ80T11 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.01□□□□□ -0.01
Ush1gQ80T11 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Gm37424-201ENSMUST00000191727 561 ntBASIC15.01□□□□□ -0.01
Ush1gQ80T11 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.01□□□□□ -0.01
Ush1gQ80T11 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.01□□□□□ -0.01
Ush1gQ80T11 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.01□□□□□ -0.01
Ush1gQ80T11 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.01□□□□□ -0.01
Ush1gQ80T11 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ush1gQ80T11 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15□□□□□ -0.01
Ush1gQ80T11 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ush1gQ80T11 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ush1gQ80T11 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ush1gQ80T11 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Gm14660-201ENSMUST00000119809 575 ntBASIC15□□□□□ -0.01
Ush1gQ80T11 Gm12416-201ENSMUST00000120911 1008 ntBASIC15□□□□□ -0.01
Ush1gQ80T11 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15□□□□□ -0.01
Ush1gQ80T11 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Ush1gQ80T11 Gm27731-201ENSMUST00000185192 107 ntBASIC15□□□□□ -0.01
Ush1gQ80T11 Gm29649-201ENSMUST00000185649 419 ntBASIC15□□□□□ -0.01
Ush1gQ80T11 Gm29741-201ENSMUST00000192667 421 ntBASIC15□□□□□ -0.01
Ush1gQ80T11 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15□□□□□ -0.01
Ush1gQ80T11 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15□□□□□ -0.01
Ush1gQ80T11 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ush1gQ80T11 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ush1gQ80T11 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ush1gQ80T11 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ush1gQ80T11 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms