Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.72□□□□□ -0.37
Pif1Q80SX8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm3222-201ENSMUST00000071282 990 ntBASIC12.72□□□□□ -0.37
Pif1Q80SX8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Gm12928-201ENSMUST00000117115 573 ntBASIC12.71□□□□□ -0.37
Pif1Q80SX8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.71□□□□□ -0.37
Pif1Q80SX8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Gm8463-201ENSMUST00000208573 613 ntBASIC12.71□□□□□ -0.37
Pif1Q80SX8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pif1Q80SX8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.71□□□□□ -0.38
Pif1Q80SX8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pif1Q80SX8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.7□□□□□ -0.38
Pif1Q80SX8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm43221-201ENSMUST00000197612 2071 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm24420-201ENSMUST00000176676 59 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm7287-201ENSMUST00000205267 602 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.7□□□□□ -0.38
Pif1Q80SX8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms