Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Gm6334-201ENSMUST00000207083 228 ntBASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Snrnp40Q6PE01 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gm25261-201ENSMUST00000157416 134 ntBASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gm29396-201ENSMUST00000185659 716 ntBASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gm45865-201ENSMUST00000211815 945 ntBASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gm10146-201ENSMUST00000072739 309 ntBASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Snrnp40Q6PE01 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Gm26461-201ENSMUST00000175064 290 ntBASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms