Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf220Q6PDX6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf220Q6PDX6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Gm5939-201ENSMUST00000119613 2874 ntBASIC13□□□□□ -0.33
Rnf220Q6PDX6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Mir8098-201ENSMUST00000184011 137 ntBASIC13□□□□□ -0.33
Rnf220Q6PDX6 Gm42670-201ENSMUST00000201816 1292 ntBASIC13□□□□□ -0.33
Rnf220Q6PDX6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13□□□□□ -0.33
Rnf220Q6PDX6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13□□□□□ -0.33
Rnf220Q6PDX6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Gm19817-201ENSMUST00000199764 2132 ntBASIC13□□□□□ -0.33
Rnf220Q6PDX6 Gm43423-201ENSMUST00000198390 2094 ntBASIC13□□□□□ -0.33
Rnf220Q6PDX6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf220Q6PDX6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf220Q6PDX6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms