Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Gm5781-201ENSMUST00000219792 443 ntBASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Gm2231-201ENSMUST00000125661 612 ntBASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Gm32025-201ENSMUST00000217960 307 ntBASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd4Q6PDQ2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Gm4857-201ENSMUST00000192718 785 ntBASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Gm19163-201ENSMUST00000223313 780 ntBASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Gm9368-201ENSMUST00000219348 831 ntBASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd4Q6PDQ2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Gm4986-201ENSMUST00000119731 549 ntBASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Gm11964-201ENSMUST00000120982 444 ntBASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Gm6458-201ENSMUST00000211573 635 ntBASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd4Q6PDQ2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Chd4Q6PDQ2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chd4Q6PDQ2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Chd4Q6PDQ2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chd4Q6PDQ2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chd4Q6PDQ2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chd4Q6PDQ2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chd4Q6PDQ2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Chd4Q6PDQ2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms